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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75046122_75056056_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75046122 - 75056056

Intron Length:

9935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGCCATTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

AGATACTCAGCT

Flanking Amino Acid:

DTAVVALNLEGVVFPYSPRL

Intron Amino Acid Position:

141

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

0.55

1.1

63.4

44.3

Major PPT

77.9

0.63

0.9

74.1

35.3

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

47.7

-0

1.9

66.26

43.3

Associated Gene:

Gene:

HAPLN1

Ensembl Gene ID:

ENSAPLG00000016285

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025355

75004898 - 75063923

59026

ENSAPLT00000016999

75041676 - 75063318

21643