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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75114703_75128523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75114703 - 75128523

Intron Length:

13821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGATGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTTCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

CTGGGAATAATG

Flanking Amino Acid:

DFRWTDGSPLQYENWRPNQP

Intron Amino Acid Position:

3395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

68.6

37.4

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

88.2

0.86

0.6

24.1

Minor 5ss

38.4

-1.3

3.1

47.7

42.5

Minor BPS

37.9

-1

2.1

40.62

Associated Gene:

Gene:

VCAN

Ensembl Gene ID:

ENSAPLG00000016034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042610

75111403 - 75215393

103991

ENSAPLT00000036310

75111403 - 75215393

103991

ENSAPLT00000016757

75111403 - 75215399

103997