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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75137004_75139269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75137004 - 75139269

Intron Length:

2266

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGGTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTATGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

TTATCTTTATGT

Flanking Amino Acid:

PGFNGEQCELDIDECQSNPC

Intron Amino Acid Position:

3276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.93

0.9

75.7

36.7

Major BPS

78.6

0.71

78.6

Major PPT

78.2

0.63

0.9

73.2

36.9

Minor 5ss

36.1

-1.6

3.3

47.1

48.3

Minor BPS

61.2

0.43

1.9

80.4

41.8

Associated Gene:

Gene:

VCAN

Ensembl Gene ID:

ENSAPLG00000016034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036310

75111403 - 75215393

103991

ENSAPLT00000016757

75111403 - 75215399

103997