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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75139384_75141159_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75139384 - 75141159

Intron Length:

1776

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCTACTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

TTCTACTTAACA

Flanking Amino Acid:

SVEGTAVQIPGQDPCKSNPC

Intron Amino Acid Position:

3238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

33.4

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

77.7

0.62

0.9

73.4

35.6

Minor 5ss

48.4

-0.1

2.5

68.6

42.1

Minor BPS

78.6

0.89

1.4

84.46

35.5

Associated Gene:

Gene:

VCAN

Ensembl Gene ID:

ENSAPLG00000016034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042610

75111403 - 75215393

103991

ENSAPLT00000036310

75111403 - 75215393

103991

ENSAPLT00000016757

75111403 - 75215399

103997