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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75146671_75165720_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75146671 - 75165720

Intron Length:

19050

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

GGATTATGAAAA

Flanking Amino Acid:

YVIQITGNDTDHPVNELLDL

Intron Amino Acid Position:

1401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.2

1.04

0.7

90.6

21.2

Major BPS

75.5

0.63

40.9

Major PPT

96.3

1.04

0.5

92.6

17.2

Minor 5ss

43.9

-0.7

3.2

64.8

46.5

Minor BPS

45.7

-0.3

1.7

53.64

37.3

Associated Gene:

Gene:

VCAN

Ensembl Gene ID:

ENSAPLG00000016034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042610

75111403 - 75215393

103991

ENSAPLT00000036310

75111403 - 75215393

103991

ENSAPLT00000016757

75111403 - 75215399

103997