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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75168883_75181029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75168883 - 75181029

Intron Length:

12147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGCTTT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TTTTTTTTTAAG

Flanking Amino Acid:

DSKFDAYCYERKKIVTEPTT

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.3

78.8

38.3

Major BPS

0.52

1.1

77.7

35.3

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

54.2

0.14

2.7

72.8

37.2

Minor BPS

56.3

0.05

1.8

67.7

39.9

Associated Gene:

Gene:

VCAN

Ensembl Gene ID:

ENSAPLG00000016034

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042610

75111403 - 75215393

103991

ENSAPLT00000036310

75111403 - 75215393

103991

ENSAPLT00000016757

75111403 - 75215399

103997