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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75352834_75408711_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75352834 - 75408711

Intron Length:

55878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTACA

5'SS Class:

major

3'SS Sequence:

CCTTTTGTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAC

U12 Branch Point Sequence:

GGTGAAGTAACT

Flanking Amino Acid:

SYERNLKDGSFRLGSLKLQK

Intron Amino Acid Position:

110

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

36.3

Major BPS

57.9

0.2

1.1

59.4

34.8

Major PPT

79.7

0.67

0.8

72.6

37.6

Minor 5ss

38.9

-1.2

2.7

53.8

42.8

Minor BPS

42.8

-0.4

2.4

63.89

45.5

Associated Gene:

Gene:

XRCC4

Ensembl Gene ID:

ENSAPLG00000016008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043638

75250615 - 75423843

173229

ENSAPLT00000016701

75308643 - 75415736

107094