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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75448997_75452061_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

75448997 - 75452061

Intron Length:

3065

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCACCCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

TATGCCTGGATT

Flanking Amino Acid:

LGIFWKCARIGERKSPYVAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

82.5

30.8

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

56.3

0.14

52.8

30.3

Minor 5ss

46.3

-0.4

2.8

64.2

42.3

Minor BPS

60.4

0.41

1.6

76.63

40.2

Associated Gene:

Gene:

TMEM167A

Ensembl Gene ID:

ENSAPLG00000015984

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016671

75443412 - 75452132

8721