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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7568_8872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7568 - 8872

Intron Length:

1305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

CTGCTCCCAGCC

Flanking Amino Acid:

LITRIFCLQKAGCPLPRAVE

Intron Amino Acid Position:

518

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

75.5

40.6

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

82.7

0.74

0.7

80.4

Minor 5ss

35.6

-1.6

3.2

47.4

Minor BPS

40.3

-0.7

1.9

48.4

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005506

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005719

2781 - 13437

10657