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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75726870_75729809_R

Intron Information:

Intron Rank:

139040

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

75726870 - 75729809

Intron Length:

2940

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCTACCGA

5'SS Class:

weak_major

3'SS Sequence:

TTTTTCTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTGGAA

U12 Branch Point Sequence:

CCATTGGAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.3

0.1

1.3

45.8

44.1

Major BPS

53.4

0.09

1.4

55.1

42.1

Major PPT

90.9

0.92

0.6

84.7

30.2

Minor 5ss

38.1

-1.3

48.4

47.1

Minor BPS

36.3

-0.9

2.5

50.74

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022288

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039406

75726575 - 75731468

4894