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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75729942_75731159_R

Intron Information:

Intron Rank:
139041
Intron Class:
major
Intron Phase:
Intron Coordinates:
75729942 - 75731159
Intron Length:
1218

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAAGGGAG
5'SS Class:
strong_major
3'SS Sequence:
TTATTCTTTTCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
ATTTATTTACTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
88.5
0.91
0.9
73
38.2
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
90.3
0.91
0.7
88.9
27.7
Minor 5ss
28.6
-2.5
3.5
36.8
47.7
Minor BPS
59.5
0.38
1.8
78.91
37.7

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000022288
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000039406
75726575 - 75731468
4894