Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75827268_75828742_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

75827268 - 75828742

Intron Length:

1475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTACA

5'SS Class:

strong_major

3'SS Sequence:

TGTGGCCCATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CATCTTTTGATA

Flanking Amino Acid:

FIVNQVAVTQVVSYNLSRKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

82.6

29.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

63.9

0.31

60.2

41.5

Minor 5ss

36.1

-1.6

2.6

Minor BPS

54.6

0.14

1.2

59.28

34.6

Associated Gene:

Gene:

ATP6AP1L

Ensembl Gene ID:

ENSAPLG00000005367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005543

75820928 - 75835911

14984