Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_75962322_75962836_R

Intron Information:

Intron Rank:

138044

Intron Class:

major

Intron Phase:

Intron Coordinates:

75962322 - 75962836

Intron Length:

515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTCAT

5'SS Class:

major

3'SS Sequence:

TTTTTCTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

40.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.9

0.6

89.8

18.6

Minor 5ss

34.9

-1.7

3.2

50.2

Minor BPS

59.9

0.31

1.8

75.92

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021796

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039368

75962179 - 75975343

13165