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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76235951_76236229_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
76235951 - 76236229

Intron Length:
279

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTACGGTTC

5'SS Class:
major

3'SS Sequence:
TGGAATTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
GTATCGTAAACT

Flanking Amino Acid:
KCKAKIDPAAGAFPYAKCFI

Intron Amino Acid Position:
153

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.9
0.56
1.1
66.8
39.6

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
72.8
0.51
1
65.6
45

Minor 5ss
40.4
-1.1
3.5
55.2
44.7

Minor BPS
53.8
0.2
2.4
77.58
44.5

Associated Gene:

Gene:
ZCCHC9

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76231690 - 76237148
5459

76231690 - 76237148
5459