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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76266002_76266733_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76266002 - 76266733

Intron Length:

732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGAGCT

5'SS Class:

major

3'SS Sequence:

TTATTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AACTTTTTATTT

Flanking Amino Acid:

EEALRILQSMAVFNKATSHT

Intron Amino Acid Position:

256

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

65.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

0.88

0.7

89.1

27.6

Minor 5ss

31.8

-2.1

3.7

44.6

44.4

Minor BPS

54.1

0.21

1.5

66.33

39.3

Associated Gene:

Gene:

CCDC125

Ensembl Gene ID:

ENSAPLG00000006296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006541

76262165 - 76275313

13149