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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76266812_76267519_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76266812 - 76267519

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTATAATGAACT

Flanking Amino Acid:

TEEEKRTLEKEINILQWEIE

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

86.5

0.82

0.7

80.7

31.4

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

57.2

0.3

1.9

80.85

39.7

Associated Gene:

Gene:

CCDC125

Ensembl Gene ID:

ENSAPLG00000006296

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006541

76262165 - 76275313

13149