Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76305207_76306074_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76305207 - 76306074

Intron Length:

868

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAATCTTT

5'SS Class:

major

3'SS Sequence:

GTTCTTATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTGTTCTTATTC

Flanking Amino Acid:

GLRVSVDSDMVEYLAGSGGQ

Intron Amino Acid Position:

1457

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

73.4

38.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.3

0.64

0.9

70.6

39.9

Minor 5ss

50.1

2.8

70.5

Minor BPS

0.29

1.6

66.27

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006813

76274703 - 76306236

31534