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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76309450_76312790_F

Intron Information:

Intron Rank:
2
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
76309450 - 76312790
Intron Length:
3341

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTATTTCAA
5'SS Class:
major
3'SS Sequence:
GTTGCTGGCACAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ACCTCAT
U12 Branch Point Sequence:
CTCACCTCATCT
Flanking Amino Acid:
TDKGIKLDFKSLDAVQPSLE
Intron Amino Acid Position:
102

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76.7
0.63
1
68.7
37.6
Major BPS
73.5
0.58
1
73.6
32.5
Major PPT
63.2
0.3
1.1
56.6
43.4
Minor 5ss
39.7
-1.2
2.8
49.9
46.3
Minor BPS
49.8
0.07
1.9
68.8
47.6

Associated Gene:

Gene:
FAM151B
Ensembl Gene ID:
ENSAPLG00000026983
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000034049
76307890 - 76318523
10634