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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76372998_76399992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76372998 - 76399992

Intron Length:

26995

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTTCT

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

CAATCTGTATTT

Flanking Amino Acid:

EKLINSVTSMRLRDDRIRIE

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.2

29.4

Major BPS

0.55

1.1

63.4

44.3

Major PPT

86.6

0.82

0.8

81.1

35.9

Minor 5ss

48.9

-0.1

2.4

68.1

42.9

Minor BPS

45.3

-0.2

2.2

61.18

43.3

Associated Gene:

Gene:

MSH3

Ensembl Gene ID:

ENSAPLG00000007056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007394

76362751 - 76473013

110263