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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76401569_76408114_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76401569 - 76408114

Intron Length:

6546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTCCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

AACCTCTGAAAT

Flanking Amino Acid:

FNLEKMLYNPSNFKRLSSET

Intron Amino Acid Position:

479

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.6

1.1

0.7

87.5

21.2

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

84.9

0.78

0.7

84.1

23.9

Minor 5ss

40.5

-1.1

2.8

45.2

Minor BPS

49.6

0.05

1.5

63.34

40.1

Associated Gene:

Gene:

MSH3

Ensembl Gene ID:

ENSAPLG00000007056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007394

76362751 - 76473013

110263