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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76419443_76427577_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

76419443 - 76427577

Intron Length:

8135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATACCCG

5'SS Class:

major

3'SS Sequence:

CTTCCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

TAATACATAGTA

Flanking Amino Acid:

RGLCSVFHKKCSTQEFFLIV

Intron Amino Acid Position:

589

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.6

0.44

1.1

52.2

44.6

Major BPS

0.75

78.6

Major PPT

85.8

0.8

0.7

80.2

Minor 5ss

43.6

-0.7

2.9

47.3

Minor BPS

46.6

-0.2

1.9

60.01

39.3

Associated Gene:

Gene:

MSH3

Ensembl Gene ID:

ENSAPLG00000007056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007394

76362751 - 76473013

110263