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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76562643_76572136_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
76562643 - 76572136

Intron Length:
9494

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGATAT

5'SS Class:
strong_major

3'SS Sequence:
TGATTGTTATTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAT

U12 Branch Point Sequence:
TTCATTTTGATT

Flanking Amino Acid:
LDTSQTFIRQGSLIQVPSVE

Intron Amino Acid Position:
463

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
93.1
1.02
0.7
86.8
22.9

Major BPS
100
1.24
0.5
100
0

Major PPT
67.9
0.4
1
67.1
43.5

Minor 5ss
39.6
-1.2
3.1
55.7
48.5

Minor BPS
61.3
0.44
1.2
74.39
37.2

Associated Gene:

Gene:
RASGRF2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76500680 - 76634618
133939

76500680 - 76635422
134743