Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76579077_76582078_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

76579077 - 76582078

Intron Length:

3002

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTCTTT

5'SS Class:

weak_major

3'SS Sequence:

TCTTTTAAAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAG

Flanking Amino Acid:

CNKLRRSIRRAVLESVSVDR

Intron Amino Acid Position:

825

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

73.3

38.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

74.2

0.54

71.7

37.1

Minor 5ss

70.8

0.7

2.2

82.3

37.4

Minor BPS

65.1

0.33

1.4

69.62

37.6

Associated Gene:

Gene:

RASGRF2

Ensembl Gene ID:

ENSAPLG00000006824

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030089

76500680 - 76634618

133939

ENSAPLT00000007108

76500680 - 76635422

134743