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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76631939_76633681_F


Intron Information:

Intron Rank:
24

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
76631939 - 76633681

Intron Length:
1743

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTATGTTTA

5'SS Class:
major

3'SS Sequence:
TATTGTTTTACAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATAGAT

U12 Branch Point Sequence:
TATTGTTTTACA

Flanking Amino Acid:
RFKNLRETLKNCNPPAVPYL

Intron Amino Acid Position:
1146

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.9
0.71
0.9
79.5
29.4

Major BPS
71.4
0.53
1
67
39.8

Major PPT
86.1
0.81
0.8
80.1
37.1

Minor 5ss
55.6
0.19
2.3
66.5
39

Minor BPS
55.9
0.18
2.1
71.96
40.5

Associated Gene:

Gene:
RASGRF2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76500680 - 76635422
134743