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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_76660573_76662485_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
76660573 - 76662485

Intron Length:
1913

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CTG|GTACGTTGT

5'SS Class:
major

3'SS Sequence:
TCCTTTCAACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAA

U12 Branch Point Sequence:
TTCCTTTCAACC

Flanking Amino Acid:
ARDWPDARGIWHNNDKTFLI

Intron Amino Acid Position:
252

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.9
0.68
1
71.6
40.8

Major BPS
78
0.7
0.9
79.6
29.1

Major PPT
72.3
0.5
0.9
66.8
38.5

Minor 5ss
41
-1
3.1
55.6
43.9

Minor BPS
57.9
0.23
1.5
67.33
38.5

Associated Gene:

Gene:
CKMT2

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

76654580 - 76668756
14177