About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_767120_767314_F


Intron Information:

Intron Rank:
136115

Intron Class:
major

Intron Phase:

Intron Coordinates:
767120 - 767314

Intron Length:
195

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGCGAG

5'SS Class:
major

3'SS Sequence:
TCCTCTCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTGCCAT

U12 Branch Point Sequence:
AGACCCTCACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1.1
63.2
43.4

Major BPS
62.2
0.3
1.4
72.5
43.5

Major PPT
77
0.61
0.7
69
31.5

Minor 5ss
34.3
-1.8
3.6
45.4
49.7

Minor BPS
48.1
-0.1
1.8
57.86
40.8

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

766853 - 768397
1545