Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_772825_773284_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

772825 - 773284

Intron Length:

460

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGAGGG

5'SS Class:

major

3'SS Sequence:

ATGATTGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATGAT

U12 Branch Point Sequence:

GCTGCCAAAACA

Flanking Amino Acid:

GLLVLGCILHANTAKVMPRP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

61.1

43.9

Major BPS

64.5

0.36

1.1

55.4

40.3

Major PPT

73.6

0.53

69.8

45.2

Minor 5ss

30.3

-2.3

3.3

39.2

Minor BPS

47.7

-0.1

60.7

45.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025655

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024190

772767 - 774516

1750