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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78064440_78064612_R

Intron Information:

Intron Rank:

129615

Intron Class:

major

Intron Phase:

Intron Coordinates:

78064440 - 78064612

Intron Length:

173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

AGCTTCTGAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

82.1

0.8

71.6

36.4

Major PPT

92.1

0.95

0.5

92.3

18.1

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

55.8

0.26

1.6

69.21

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035767

78063835 - 78064995

1161