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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78131279_78131804_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
78131279 - 78131804

Intron Length:
526

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTAATCCTC

5'SS Class:
major

3'SS Sequence:
CTTTTTTCCTTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATATGAA

U12 Branch Point Sequence:
GGTATGTGGACT

Flanking Amino Acid:
STYRTQEGELRVLAATQFEP

Intron Amino Acid Position:
163

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.4
0.46
1.1
60.3
44.6

Major BPS
66.7
0.41
1
57.8
39

Major PPT
84.6
0.78
0.6
84.9
22.7

Minor 5ss
43
-0.8
3.1
60.9
43.6

Minor BPS
43.7
-0.4
2.2
61.85
41.8

Associated Gene:

Gene:
ERAP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

78130791 - 78147433
16643