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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78133331_78133908_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
78133331 - 78133908

Intron Length:
578

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTAACTATT

5'SS Class:
major

3'SS Sequence:
TTGTTTACTGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TGGCATTTAAAT

Flanking Amino Acid:
ISKISSHGVNISVYTVPEKI

Intron Amino Acid Position:
255

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.4
0.58
1.2
83.8
34.5

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
79.2
0.66
0.8
75.1
34.6

Minor 5ss
49.6
-0
2.6
73.5
35.5

Minor BPS
53.2
0.18
1.6
68.74
41.5

Associated Gene:

Gene:
ERAP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

78130791 - 78147433
16643