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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78154928_78156307_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

78154928 - 78156307

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTTAATTTT

5'SS Class:

weak_major

3'SS Sequence:

AACGTTATTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

TATTGTATGACT

Flanking Amino Acid:

ESGDQVRKNSKPTDESAAID

Intron Amino Acid Position:

106

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.3

66.6

39.3

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

70.3

0.46

62.8

42.2

Minor 5ss

44.8

-0.6

69.5

40.8

Minor BPS

51.6

0.13

2.1

76.83

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025538

78154718 - 78160392

5675