Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78191769_78199846_R

Intron Information:

Intron Rank:

143227

Intron Class:

major

Intron Phase:

Intron Coordinates:

78191769 - 78199846

Intron Length:

8078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGCGT

5'SS Class:

major

3'SS Sequence:

TAACTCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TAACTATTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

66.2

44.9

Major BPS

81.9

0.79

0.8

81.9

Major PPT

79.4

0.66

0.9

73.4

36.4

Minor 5ss

32.5

-2

3.4

48.2

47.3

Minor BPS

62.5

0.47

1.6

77.02

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020236

78191555 - 78214958

23404

ENSAPLT00000018776

78191555 - 78214958

23404