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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78248504_78249764_F

Intron Information:

Intron Rank:

133063

Intron Class:

major

Intron Phase:

Intron Coordinates:

78248504 - 78249764

Intron Length:

1261

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGTAGC

5'SS Class:

major

3'SS Sequence:

TGTCCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

TGTTAACTAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

70.9

39.3

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

86.6

0.82

0.7

84.4

30.5

Minor 5ss

44.6

-0.6

2.5

58.5

39.4

Minor BPS

45.8

-0.2

2.3

72.18

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042903

78248430 - 78252760

4331