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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78249978_78252348_F

Intron Information:

Intron Rank:

133064

Intron Class:

major

Intron Phase:

Intron Coordinates:

78249978 - 78252348

Intron Length:

2371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TGCATCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GTGTTTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

80.1

30.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.4

0.53

0.9

66.2

35.7

Minor 5ss

34.1

-1.8

2.8

39.6

46.4

Minor BPS

57.8

0.32

1.6

71.48

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021547

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042903

78248430 - 78252760

4331