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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78270784_78271878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78270784 - 78271878

Intron Length:

1095

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGCG

5'SS Class:

major

3'SS Sequence:

CTCTGTCTTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAT

U12 Branch Point Sequence:

TCTGTCTTATAG

Flanking Amino Acid:

EELGYDLVGQIGSLKNHYLF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

62.3

41.3

Major BPS

64.7

0.37

1.3

74.7

Major PPT

77.9

0.63

0.8

72.2

32.6

Minor 5ss

28.5

-2.5

3.6

38.6

46.6

Minor BPS

48.6

-0.2

1.9

55.55

45.9

Associated Gene:

Gene:

PCSK1

Ensembl Gene ID:

ENSAPLG00000005737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005967

78270604 - 78303772

33169