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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78271984_78280719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78271984 - 78280719

Intron Length:

8736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CAAATAATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ATTTTTACAAAT

Flanking Amino Acid:

ITKRLSDDERVSWAEQQYEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

81.3

32.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

60.2

0.23

52.4

41.1

Minor 5ss

32.7

-2

3.4

40.8

45.4

Minor BPS

48.7

-0

1.8

72.64

37.9

Associated Gene:

Gene:

PCSK1

Ensembl Gene ID:

ENSAPLG00000005737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005967

78270604 - 78303772

33169