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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78280831_78283029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78280831 - 78283029

Intron Length:

2199

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGTCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ACGTTTCTAATC

Flanking Amino Acid:

DPMWNQQWYLQDTRITPSLP

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

79.4

0.66

0.8

77.2

31.6

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

49.4

-0

1.6

56.14

37.1

Associated Gene:

Gene:

PCSK1

Ensembl Gene ID:

ENSAPLG00000005737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005967

78270604 - 78303772

33169