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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78283177_78283604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78283177 - 78283604

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTAAATGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTCTTCTAAATG

Flanking Amino Acid:

WNHTDIYTNYDPKASYDFND

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

80.8

34.4

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

69.1

0.43

0.9

63.9

35.9

Minor 5ss

46.2

-0.4

2.8

62.9

41.8

Minor BPS

61.1

0.21

1.7

66.07

42.7

Associated Gene:

Gene:

PCSK1

Ensembl Gene ID:

ENSAPLG00000005737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005967

78270604 - 78303772

33169