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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78292392_78293576_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78292392 - 78293576

Intron Length:

1185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAGGTTGT

5'SS Class:

major

3'SS Sequence:

GTTTTTCTGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TTTCAGACAATT

Flanking Amino Acid:

SSGDYTDQRITSADLHNECT

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.8

0.4

1.1

64.4

42.2

Major BPS

0.65

1.5

85.7

34.9

Major PPT

0.7

81.2

36.5

Minor 5ss

43.1

-0.8

3.2

63.1

42.9

Minor BPS

41.3

-0.5

2.4

68.02

42.5

Associated Gene:

Gene:

PCSK1

Ensembl Gene ID:

ENSAPLG00000005737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005967

78270604 - 78303772

33169