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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78293678_78294662_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78293678 - 78294662

Intron Length:

985

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

ATTCTCTCAACA

Flanking Amino Acid:

AGIFALALEANPNLTWRDMQ

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

75.3

35.6

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

75.3

0.57

0.9

70.6

34.2

Minor 5ss

41.4

-1

3.1

56.7

41.9

Minor BPS

66.1

0.5

1.5

75.6

Associated Gene:

Gene:

PCSK1

Ensembl Gene ID:

ENSAPLG00000005737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005967

78270604 - 78303772

33169