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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78296518_78298262_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78296518 - 78298262

Intron Length:

1745

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TGCACTAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

CTTGCACTAACA

Flanking Amino Acid:

DLHVTLVSPSGTSTVLLAER

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

34.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

61.2

0.25

54.3

39.3

Minor 5ss

34.6

-1.7

3.5

45.7

49.5

Minor BPS

50.9

0.02

2.1

69.21

42.9

Associated Gene:

Gene:

PCSK1

Ensembl Gene ID:

ENSAPLG00000005737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005967

78270604 - 78303772

33169