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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78300400_78301982_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78300400 - 78301982

Intron Length:

1583

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGCGTCA

5'SS Class:

major

3'SS Sequence:

ATCTGCATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TGACACTTAACC

Flanking Amino Acid:

GVEKMTDLVEDHTTQENLSE

Intron Amino Acid Position:

629

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.5

0.39

1.2

60.2

41.4

Major BPS

79.1

0.72

69.3

38.4

Major PPT

69.1

0.43

0.9

59.6

41.1

Minor 5ss

41.2

-1

3.4

56.5

47.9

Minor BPS

65.7

0.47

1.5

71.36

38.7

Associated Gene:

Gene:

PCSK1

Ensembl Gene ID:

ENSAPLG00000005737

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005967

78270604 - 78303772

33169