Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78440532_78440659_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78440532 - 78440659

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCTTTACA

Flanking Amino Acid:

VLEEYRKVQQSSPNYYEEKY

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.2

28.6

Major BPS

100

1.24

0.5

100

Major PPT

96.1

1.04

0.5

91.7

19.5

Minor 5ss

42.4

-0.8

3.1

57.6

47.1

Minor BPS

77.1

0.85

1.5

87.01

30.8

Associated Gene:

Gene:

ELL2

Ensembl Gene ID:

ENSAPLG00000005474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022626

78406328 - 78441515

35188