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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78529667_78530518_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
78529667 - 78530518

Intron Length:
852

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATCAGA

5'SS Class:
major

3'SS Sequence:
TATGTATTTTCAG|T

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATGTAT

U12 Branch Point Sequence:
TTACCACCAAGC

Flanking Amino Acid:
LDYTSGHHSVSNRVEAWTRD

Intron Amino Acid Position:
106

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.3
0.69
1
70.8
41.1

Major BPS
63.7
0.34
1.4
63.7
43.9

Major PPT
81.4
0.71
0.9
78
40.1

Minor 5ss
38.8
-1.3
2.8
49.6
46.2

Minor BPS
40.8
-0.7
2.2
55.63
41.6

Associated Gene:

Gene:
ARSK

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

78522803 - 78530998
8196

78521244 - 78530933
9690