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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78530749_78530846_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
78530749 - 78530846

Intron Length:
98

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTGATCCAC

5'SS Class:
major

3'SS Sequence:
ATCCATTCTGAAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAA

U12 Branch Point Sequence:
TTGCATTTAAAA

Flanking Amino Acid:
IFAAHNDEKNYIQLSFRQEA

Intron Amino Acid Position:
30

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.3
0.27
1.1
54.2
38.8

Major BPS
81.6
0.78
0.8
82
24.9

Major PPT
64.7
0.33
1.1
64.2
36

Minor 5ss
35.2
-1.7
3.1
46.5
42.3

Minor BPS
56.5
0.2
1.6
67.2
38.8

Associated Gene:

Gene:
ARSK

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

78521244 - 78530933
9690