Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78538842_78539482_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78538842 - 78539482

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

GCTTGTTTGATT

Flanking Amino Acid:

VYKKLLELYESGDKQKWCNV

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

87.2

0.84

0.6

31.1

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

55.2

0.24

1.8

70.84

41.1

Associated Gene:

Gene:

TTC37

Ensembl Gene ID:

ENSAPLG00000004474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038438

78535999 - 78579067

43069

ENSAPLT00000029955

78535999 - 78583379

47381

ENSAPLT00000022679

78535999 - 78583311

47313

ENSAPLT00000004661

78535999 - 78583379

47381

ENSAPLT00000043925

78535999 - 78582545

46547