Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78558572_78559554_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78558572 - 78559554

Intron Length:

983

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAATA

5'SS Class:

strong_major

3'SS Sequence:

CATGTTTCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTCAT

U12 Branch Point Sequence:

GTGTGTGTGATT

Flanking Amino Acid:

KKIELLRLGGRCYGRALKLM

Intron Amino Acid Position:

763

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

82.7

29.3

Major BPS

74.4

0.61

1.2

77.7

37.1

Major PPT

75.2

0.57

0.9

69.9

36.2

Minor 5ss

37.1

-1.5

49.4

46.4

Minor BPS

43.6

-0.4

2.3

62.51

42.8

Associated Gene:

Gene:

TTC37

Ensembl Gene ID:

ENSAPLG00000004474

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038438

78535999 - 78579067

43069

ENSAPLT00000029955

78535999 - 78583379

47381

ENSAPLT00000022679

78535999 - 78583311

47313

ENSAPLT00000004661

78535999 - 78583379

47381

ENSAPLT00000043925

78535999 - 78582545

46547