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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78722700_78745717_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78722700 - 78745717

Intron Length:

23018

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATTTTGTTAACA

Flanking Amino Acid:

GQNLAARDRGGTSDPYVKFK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.08

0.7

85.2

32.2

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

78.3

0.64

73.8

Minor 5ss

36.3

-1.6

3.3

48.7

47.5

Minor BPS

67.9

0.56

81.19

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046019

78720340 - 78753724

33385

ENSAPLT00000017484

78721363 - 78753724

32362