Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78916244_78919197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78916244 - 78919197

Intron Length:

2954

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTATTATTAATA

Flanking Amino Acid:

EIGKLLLQHGGPVLLQQRDS

Intron Amino Acid Position:

768

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

0.9

71.1

34.7

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

86.7

0.83

0.7

81.4

29.8

Minor 5ss

27.1

-2.6

2.9

24.2

36.8

Minor BPS

68.4

0.58

1.5

77.1

33.4

Associated Gene:

Gene:

SLF1

Ensembl Gene ID:

ENSAPLG00000004056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028901

78915759 - 78951898

36140

ENSAPLT00000004155

78915759 - 78952066

36308