Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78922646_78924584_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78922646 - 78924584

Intron Length:

1939

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

ACTTTTGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

TTTACACAAACT

Flanking Amino Acid:

STEPLSLQKIVCSYLPALRE

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

76.9

31.6

Major BPS

72.8

0.57

30.3

Major PPT

0.47

66.2

39.1

Minor 5ss

37.9

-1.4

2.7

47.4

36.1

Minor BPS

48.7

-0

2.2

79.07

42.4

Associated Gene:

Gene:

SLF1

Ensembl Gene ID:

ENSAPLG00000004056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028901

78915759 - 78951898

36140

ENSAPLT00000004155

78915759 - 78952066

36308